Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFL-RKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKL-NQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND |
| 4A6V Chain:B ((3-254)) | -ISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDD- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102462 for 2179 contacts (-47.0/contact) +
2D Compatibility (PS) -26672 + (NN) -7417 + (LL) 132
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -160219.0 ( -73.53 by residue)
QMean score : 0.567
|
|
|