Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGEKEFRRLEHEKLKELA-TTKAVIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRLKGDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTDNRNQQEVAQTILTMLDK
2PT5 Chain:A ((9-162))
MCSGKSTVGSLLSRSLNIPFYDVDEEVQKREGLSIPQIFEKKGEAYFRKLEFEVLKDLSEKENVVISTGGGLGANEEALNFMKSRGTTVFIDIPFEVFLERCKDSKERPLLKRP-LDEIKNLFEERRKIYSK-ADIKVKGEK-PPEEVVKEILLSLE-
General information:
TITO was launched using:
RESULT:
Template:
2PT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56619 for 1111 contacts (-51.0/contact) +
2D Compatibility (PS) -16565 + (NN) -6279 + (LL) 188
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -94525.0 ( -85.08 by residue)
QMean score : 0.631
(partial model without unconserved sides chains):
PDB file :
Tito_2PT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PT5-query.scw
PDB file :
Tito_Scwrl_2PT5.pdb
: