Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCG--EYRLSHHVCPECG--------QYDGKDVANS
1JJ2 Chain:Z ((1-56))---TGAGTPSQGKKNTTTHTK--------CRRCGEKSYHTKKKVCSSCGFGKSAKRRDYEWQSKAGE


General information:
TITO was launched using:
RESULT:

Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -738 for 189 contacts (-3.9/contact) +
2D Compatibility (PS) -4813 + (NN) -1197 + (LL) 936
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -7762.0 ( -41.07 by residue)
QMean score : 0.742

(partial model without unconserved sides chains):
PDB file : Tito_1JJ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JJ2-query.scw
PDB file : Tito_Scwrl_1JJ2.pdb: