Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKIDG-KLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLD-EPLSK----NHQLKQKLFMLQDNLN-CWDGYKIPTIKKFYQKTYPLF---DGDKFDNLMKQVNLAK--DVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 3GFO Chain:A ((8-235)) | LKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNGILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKLPEDEIRKRVDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEK---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154478 for 1705 contacts (-90.6/contact) +
2D Compatibility (PS) -22972 + (NN) -7850 + (LL) 6684
1D Compatibility (HY) -14000 + (ID) 2550
Total energy: -195166.0 ( -114.47 by residue)
QMean score : 0.523
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