Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGKDLRNYKGIKKIMAILAVFTLVQGAAIIVMAITLARAITDLFHEHPFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPRFARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILMITLPILIVFMIILGLAAKKQADSQFETYRVLSNHFVDSLKGLETLKYLGLSHDHEGKIASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLI-DGNMNLPIALSVLILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQA-KAEKPEMDALPLTT-FAENTEFSFENITVKHGAD-DADSLHKASFTVKGFEKIGIIGATGAGKSTLIDVLSGF--LTPTSGEFH-WNGKSGASLASTDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTEDEMKKAAESAGLNKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPVVLMDEPTAHLDIETEYELKKPMLDLFEDRLV--FFATHRLHWMLEMDRIIVLDHGAVVETGTHEEL--LSRKGFYYNLVKAQLEEV |
| 3WMG Chain:A ((255-596)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGLSMLVIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAYSFVMALPDGLDTEVGERGLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMMASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQL--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142664 for 2293 contacts (-62.2/contact) +
2D Compatibility (PS) -35834 + (NN) -14177 + (LL) 23472
1D Compatibility (HY) -28800 + (ID) 5350
Total energy: -203353.0 ( -88.68 by residue)
QMean score : 0.352
|
|
|