Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------MEITIVKGDITEQEVDVIVNAANSGLLGGGGVDGAIHQAAGPDLLKECQEVINRIGSC------PAGEAVITSAGDLKA---TYIIHAVGPIWKDGE-HQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFDEENLKLYNKLINSEVV
1HJZ Chain:A ((1-192))
MEVLFEAKVGDITLKLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDYIDHGEVVVTPAMNLEERGIKYVFHTVGPICSGMWSEELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAVKNFKGS----AVKEVALVIYDRKSAEVALKVFERSL-
General information:
TITO was launched using:
RESULT:
Template:
1HJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112708 for 1458 contacts (-77.3/contact) +
2D Compatibility (PS) -19271 + (NN) -14508 + (LL) 364
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -159123.0 ( -109.14 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_1HJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HJZ-query.scw
PDB file :
Tito_Scwrl_1HJZ.pdb
: