Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQFAVDFIEASREEASAILEFLNTVTEETDFILHTVSNQ-LSLSEMETFIENTLMTKNCICLIAKLKNKVIGLITIISQSDIEIEHVGDLFIAVQKDYWGYGIGHILMEEAIEWASDNDI-TRRLELSVQGRNERAIHLYQKFGFEIDGLQTRGIKRENGEFLDIYRMSKLID
2I79 Chain:A ((2-171))
---EYELLIREAEPKDAAELVAFLNRVSLETDFTSLDGDGILLTSEEMEIFLNKQASSDNQITLLAFLNGKIAGIVNITADQRKRVRHIGDLFIVIGKRYWNNGLGSLLLEEAIEWAQAS-GILRRLQLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIEEGKFIDVYLMGKLI-
General information:
TITO was launched using:
RESULT:
Template:
2I79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118496 for 1242 contacts (-95.4/contact) +
2D Compatibility (PS) -17959 + (NN) -2872 + (LL) 92
1D Compatibility (HY) -13200 + (ID) 3650
Total energy: -156085.0 ( -125.67 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_2I79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I79-query.scw
PDB file :
Tito_Scwrl_2I79.pdb
: