Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKALFTGSFDPVTNGHLDIIERASYLFDHVYIGLFYNLEKQGYFSIECRKKMLEEAIRQFKNVSVLVAQDRLAVDLAREVGAKYFVRGLRNSQDFDYEANLEFFNKQLADDIETVYLSTSPSLSPISSSRIRELIYFKASVKPFVPKSVVREVEKMSEE
3NBA Chain:C ((24-172))
----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHG-LVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIA-GVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL--
General information:
TITO was launched using:
RESULT:
Template:
3NBA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103403 for 1122 contacts (-92.2/contact) +
2D Compatibility (PS) -16139 + (NN) -6494 + (LL) 580
1D Compatibility (HY) -15200 + (ID) 2800
Total energy: -143456.0 ( -127.86 by residue)
QMean score : 0.423
(partial model without unconserved sides chains):
PDB file :
Tito_3NBA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NBA-query.scw
PDB file :
Tito_Scwrl_3NBA.pdb
: