Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED----FKEGLPEFASIDVSFISL---NLILPALKEILVDGGQVVALIK-PQFEAGREQIGKNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 3L8D Chain:A ((52-199)) | --------------------------------------------------------------------------------KKEAEVLDVGCGDGYGTYKLSRTG-YKAVGVDISEVMIQKG-KERGEG-----PDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPR-LYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKRGVNEKMLGQLSTDLQQSLTFLWVFMLKRHK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48376 for 1026 contacts (-47.2/contact) +
2D Compatibility (PS) -14494 + (NN) 868 + (LL) 6936
1D Compatibility (HY) 800 + (ID) 1050
Total energy: -55316.0 ( -53.91 by residue)
QMean score : 0.346
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