Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVMKIIELKEATVQVSNGLAEMKTILDHVNLSIYEHDFITILGGNGAGKSTLFNVIAGTLMLSGGNIYIMGQDVTNLPAEKRAKYLSRVFQDPKMGTAPRMTVAENLLVA-KFRGEKRPLVPRKITNYTEEFQKLIARTGNGLDRHLETPTGLLSGGQRQALSLLMATLKKPNLLLLDEHTAALDPRTSVSLMGLTDEFIKQDSLTALMITHHMEDALKYGNRILVMKDGKIVRDLNQAQKNK----MAIADYYQLFD--------------------------------------------------------------------------------------------------------- |
1Z47 Chain:A ((11-355)) | -GSMTIEFVGVEKIYPGG----ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDLPPQKRN--VGLVFQNYAL--FQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFM---------RLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144194 for 1909 contacts (-75.5/contact) +
2D Compatibility (PS) -25035 + (NN) -6184 + (LL) 1484
1D Compatibility (HY) -13200 + (ID) 3000
Total energy: -190129.0 ( -99.60 by residue)
QMean score : 0.541
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