Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKFAVFASGNGSNFEAIVTRLKEENWDASAALLVCDKPQAKVIERAEAFHIPSFAFEPKSYENKAAFEQAIIEQLRLHEVELIALAGYMRLIGDTLLQAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEGMDTGPIIAQKAIEIDEHDTLETIEQRIHKLEHKWYPSVIKQLLGLNNRGEKA
1C2T Chain:B ((5-182))-----VLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVIS------------


General information:
TITO was launched using:
RESULT:

Template: 1C2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 883 -132639 -150.21 -745.16
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -150.21
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1C2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1C2T-query.scw
PDB file : Tito_Scwrl_1C2T.pdb: