Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKIYDAANWSKHE-D-DFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMPIVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMTLAPTETINEVFEWVKQNKYLQKKAQMIVGLYKAIQKDDEISLFKAMVASVYLESFLFYSGFYYPLYFYGQGKLMQSGEIINLILRDEAIHGVYVGLLAQEIYNKQTEEKKAELREFAIDLLNQLYENELEYTEDLYDQVGLSHDVKKFIRYNANKALMNLGFDPYFEEE--DINPIVLNGLNTKTKSHDFFSMKGNGYKKATVEPLKDDDFYFEDEKEQI
4N83 Chain:A ((3-287))--TYYKAINW--NAIEDVIDKSTWEKLTEQFWLDTRIPLSNDLDDWRKLSHKEKDLVGKVFGGLTLLDTLQSESGVDALRKDVRTAHEEAVFNNIQFME-SVHAKSYSSIFSTLNTKSEIDEIFAWTNTNPYLQKKAEIINEIYLNG------TALEKKIASVFLETFLFYSGFFTPLYYLGNNKLANVAEIIKLIIRDESVHGTYIGYKFQLAFNELPEDEQEKLKEWMYDLLYTLYENEEGYTESLYDTVGWTEEVKTFLRYNANKALMNLGQDPLFPDSADDVNPIVMNGIST-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4N83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1252 -130323 -104.09 -463.78
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -104.09
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.562

(partial model without unconserved sides chains):
PDB file : Tito_4N83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N83-query.scw
PDB file : Tito_Scwrl_4N83.pdb: