Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGKNPVVIGIAGGSGSGKTSVTRSIYE----QFKGHSILMIQQDLYYKDQSHLPFEERLNT-----NYDHPLAFDNDYLIEHIQDLLNYRPIEKPIYDYKLHTRSEETVHVEPKDVIILEGILVLEDKRLRDLMDIKLYVDTDADLRIIRRIMRDINERGRSIDSVIEQYVSVVRPMHNQFVEPTKRYADIIIPEGGQNHVAIDLMVTKIQTILEQNAIL
1UEI Chain:B ((21-231))---EPFLIGVSGGTASGKSSVCAKIVQLLGQ-YRQKQVVILSQDSFYR---VLTSEQKAKALKGQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNLVAINLIVQHIQDIL------


General information:
TITO was launched using:
RESULT:

Template: 1UEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 951 18101 19.03 91.42
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : 19.03
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_1UEI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UEI-query.scw
PDB file : Tito_Scwrl_1UEI.pdb: