Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDMKHTLLEALGIEIVENTAERCVAVMPVDHRTVQPFGYLHGGASVALAETAASAGAQNLIDHTTQACVGLEINANHLKSVKEGTVKAIAEPVHIGRTTIVYHIHIYDEQERLICISRCTLAVIKK
4K4B Chain:B ((38-136))------------------------ATMPVDSRTKQPFGLLHGGASVVLAESIGSV-AGYLCTEGEQKVVGLEINANHVRSAREGRVRGVCKPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL--


General information:
TITO was launched using:
RESULT:

Template: 4K4B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 452 -57802 -127.88 -583.85
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -127.88
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.495

(partial model without unconserved sides chains):
PDB file : Tito_4K4B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K4B-query.scw
PDB file : Tito_Scwrl_4K4B.pdb: