Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVSGSDSRSEPSQLSDRDLVESVLRDLSEAADKWEALVTQAETVTYSVDLGDVRAVANSDGRLLELTLHPGVMTGYAHGELADRVNLAITALRDEVEAENRARYGGRLQ
3PZD Chain:B ((1-36))
----HKPTEDPASVYEQD-------DLSEQMASLEGLMKQLNAITGS--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3PZD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7931 for 143 contacts (55.5/contact) +
2D Compatibility (PS) -4061 + (NN) -3045 + (LL) 5188
1D Compatibility (HY) -2000 + (ID) 550
Total energy: 3463.0 ( 24.22 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_3PZD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PZD-query.scw
PDB file :
Tito_Scwrl_3PZD.pdb
: