Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEAINATIQRILRTDRGITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWFPETAKPAPLGKGTA
3GZM Chain:B ((25-70))
------------------IQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3GZM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15816 for 234 contacts (-67.6/contact) +
2D Compatibility (PS) -5039 + (NN) -1864 + (LL) 2952
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -24867.0 ( -106.27 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_3GZM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GZM-query.scw
PDB file :
Tito_Scwrl_3GZM.pdb
: