Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDLSIQNLVVEY-YSGGYALRPINGLNLDVAAGSLVMLLGPSGCGKTTLLSCLGGILRPKSGAIKFDEVDITTLQGAELANYRRNKVGIVFQAFNLVPSLTAVENVMVPLRSAGMSRRASRRRAEELLARVNLAERMNHRPGDLSGGQQQRVAVARAIALDPPLILADEPTAHLDFIQVEEVLRLIRELADGERVV-VVATHDS-RMLPMADRVVELTPDFAETNRPPETVHLQAGEVLFEQSTMGD---LIYVVSEGEFEI------VHELADGGEELVKVAGPGDYFGEIGVLFHLPRSATVRARSDATAVGYTVQAFRERLGVGGLRDLIEHRALAND |
1Z47 Chain:B ((14-288)) | ----TIEFVGVEKIYPGG--ARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVT-----DLPPQKRN-VGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPG-TLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKD------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124375 for 2034 contacts (-61.1/contact) +
2D Compatibility (PS) -29023 + (NN) -11800 + (LL) 4712
1D Compatibility (HY) -17600 + (ID) 5000
Total energy: -183086.0 ( -90.01 by residue)
QMean score : 0.403
|
|
|