Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPATVVAGVDLGDAVFAAAVRAGVARVEQLMDTELRQADEVMSDSLLHLFNA--GGKRFRPLFTVLSAQI-GPQP---DAAAVTVAGAVIEMIHLATLYHDDVMDEAQVRRGAPSANAQWGNNVAILAGDYLLATASRLVARLG-PEAVRIIADTFAQLVTGQMRETRGTSENVDSIEQYLKVVQEKTGSLIGAAGRLGGMFSGATDEQVERLSRLGGVVGTAFQIADDIIDIDSESDESGKLPGTDVREGVHTLPMLYALRESGPDCARLRA-LLNGPVDDDAEVREALTLLRASPGMARAKDVLAQYAAQARHELALLPDVP------GRRALAALVDYTVSRHG |
| 3APZ Chain:A ((9-347)) | ----------------DPFSLVADELSLLSNKLREMVLAEVP------------GVQGKQFRSTILLLMATALDV--TSELRVRQRGIAEITEMIHVASLLHDD----------------VMGNKMSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGSLSDIRHGVITAPILFAMEEFPQ----LREVVDQVEK-DPRNVDIALEYLGKSKGIQRARELAMEHANLAAAAIGSLPETDNEDVKRSRRALIDLTHRVITRN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3APZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141485 for 2233 contacts (-63.4/contact) +
2D Compatibility (PS) -31256 + (NN) -21253 + (LL) 3048
1D Compatibility (HY) -14400 + (ID) 4400
Total energy: -209746.0 ( -93.93 by residue)
QMean score : 0.617
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