Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRIVQFGVSAVAAAAIGIGAGSGIAAAFDGEDEVTGPDADRARAAAVQAVPGGTAGEVETETGEGAAAYGVLVTRPDGTRVEVHLDRDFRVLDTEPADGDGG
4QOA Chain:A ((81-126))
------------------------------------------VKEYVKANFPREIITKIERG----RTGVEIELGN----DYSLKFNKKGKFVSMD-------
General information:
TITO was launched using:
RESULT:
Template:
4QOA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17568 for 268 contacts (-65.6/contact) +
2D Compatibility (PS) -4996 + (NN) -3711 + (LL) 1104
1D Compatibility (HY) -2800 + (ID) 100
Total energy: -28071.0 ( -104.74 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_4QOA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QOA-query.scw
PDB file :
Tito_Scwrl_4QOA.pdb
: