Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQEPLRVPPSAPARLVVLASGTGSLLRSLLDAA-VGDYPARVVAVGVDR-ECRAAEIAAEASVPVFTVRLADHPSRDAWDVAITAATAAHEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPALLPAFPGTHGVADALAYGVKVTGATVHLVDAGTDTGPILAQQPVPVLDGDDEETLHERIKVTERRLLVAAVAALATHGVTVVGRTATMGRKVTIG
1CDE Chain:A ((2-185))-------------NIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGDSEDDITARVQTQEHAIYPLVISWFA--------------------


General information:
TITO was launched using:
RESULT:

Template: 1CDE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139725 for 1454 contacts (-96.1/contact) +
2D Compatibility (PS) -20966 + (NN) -15128 + (LL) 1804
1D Compatibility (HY) -10400 + (ID) 3350
Total energy: -187765.0 ( -129.14 by residue)
QMean score : 0.613

(partial model without unconserved sides chains):
PDB file : Tito_1CDE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1CDE-query.scw
PDB file : Tito_Scwrl_1CDE.pdb: