Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLRRMGDASLTTELGRVLVTGGAGFVGANLVTTLLDRGH------WVRSFDRAPSLL-----PA---HPQLEVLQGDITDADVCAAAVDGIDTIFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGVQRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIRPSGIWGNGDQT--MFRKLFESVLKGHVKVLVGRKSARLDNSYVHNLIHGFILAAAHLVPDGTAPGQAYFINDAEPINMFEFARPVLEACGQRWPKMRISGPAVRWVMTGWQRLHFRFGFPAPLLEPLAVERLYLDNYFSIAKARRDLGYEPLFTTQQALTECLPYYVSLFEQMKNEARAEKTAATVKP |
1R6D Chain:A ((1-316)) | --------------MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSI----AGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS-GSWTESSPLE--PNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAG-----GRAGEIYHIGGGLELTNRELTGILLDSLGADWSS----VR--K--------VA----D--RK-------GHDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENRG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166509 for 2599 contacts (-64.1/contact) +
2D Compatibility (PS) -31818 + (NN) -14492 + (LL) 5632
1D Compatibility (HY) -8000 + (ID) 3750
Total energy: -218937.0 ( -84.24 by residue)
QMean score : 0.433
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