Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVPTVDMGIPGASVSSRSVADRPNRKRVLLAEPRGYCAGVDRAVETVERALQKHGPPVYVRHEIVHNRHVVDTLAKAGAVFVEETEQVPEGAIVVFSAHGVAPTVHVSASERNLQVIDATCPLVTKVHNEARRFARDDYDILLIGHEGHEEVVGTAGEAPDHVQLVDGVDAVDQVTVRD------EDKVVWLSQTTLSVDETMEIVGRLRRRFPKLQDPPSDDICYATQNRQVAVKAMAPECELVIVVGSRNSSNSVRLVEVALGAGARAAHLVDWADDIDSAWLDGVTTVGVTSGASVPEVLVRGVLERLAECGYDIVQPVTTANETLVFALPRELRSPR |
3DNF Chain:B ((4-280)) | ---------------------------IIIAEHAGFCFGVKRAVKLAEESLKESQGKVYTLGPIIHNPQEVNRLKNLG-VFPSQGEEFKEGDTVIIRSHGIPPEKEEALRKKGLKVIDATCPYVKAVHEAVCQLTREGYFVVLVGEKNHPEVIGTLG----YLRACNGKGIVVE-TLEDIGEALKHERVGIVAQTTQNEEFFKEVVGEIALWVKEVK--VINTICNATSLRQESVKKLAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYH-IETAEELQPEWFRGVKRVGISAGASTPDWIIEQVKSRIQE---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164551 for 2243 contacts (-73.4/contact) +
2D Compatibility (PS) -28905 + (NN) -10157 + (LL) 3296
1D Compatibility (HY) -21200 + (ID) 4600
Total energy: -226117.0 ( -100.81 by residue)
QMean score : 0.514
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