Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVAVLSGAGISAESGVPTFRDDKNGLWARFDPYELSSTQGWLRNPERVWGWYLWRHYLVANVEPNDGHRAIAAWQDHAEV-SVITQNVDDLHERAGSGAVHHLHGSLFEFRCARCGVPYT--DALPEMPEPAIEVEPPVCD-CGGLIRPDIVWFGEPLPEEPWRSAVEATGSADVMVVVGTSAIVYPAAGLPDLALARGTAVIEVNPEPTPLSGSATISIRESASQALPGLLERLPALLK
2H2H Chain:A ((19-227))
-----LTGAGISTPSGIPDF--------------NVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDV----PLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLK---------------------
General information:
TITO was launched using:
RESULT:
Template:
2H2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83060 for 1526 contacts (-54.4/contact) +
2D Compatibility (PS) -20947 + (NN) -7170 + (LL) 3216
1D Compatibility (HY) -20000 + (ID) 3750
Total energy: -131711.0 ( -86.31 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_2H2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H2H-query.scw
PDB file :
Tito_Scwrl_2H2H.pdb
: