Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDLPSLDASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS
2C92 Chain:C ((14-160))
-------DASGVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAGLPTSAEDKGAQATVAALATALTLRELRAHS
General information:
TITO was launched using:
RESULT:
Template:
2C92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115287 for 1234 contacts (-93.4/contact) +
2D Compatibility (PS) -16708 + (NN) -14031 + (LL) 176
1D Compatibility (HY) -18000 + (ID) 7350
Total energy: -171200.0 ( -138.74 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_2C92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C92-query.scw
PDB file :
Tito_Scwrl_2C92.pdb
: