Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGP-DGVLRPTHCGATLIAGLD---MDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYA-GSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGR-------VLQPLGLHKVANPDLCGFAG---ESLGFT-S-GGVRLTRTKTRP-YL--GDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGA-GYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
| 1ZQ1 Chain:A ((86-422)) | ------EGKPGLPEVTIIGTGGTIASRIDYETGAVYPAFTAEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQRSSDRPSSDAAMNLICSVRMATSE---VAEVMVVMHGETGDTYCLAHRGTKVRKMHTSRRDAFRSINDVPIAKIWPNGEIEFLRKDYRKRSDEEVEVDDKIEEKVALVKVYPGISSEIIDFLVDKGYKGIVIEGTGLGHTPNDIIPSIERAV-EEGVAVCM--TSQCIYGRVNLNVYSTGRKLLKAGVIPCEDMLPETAYVKLMWVLGHTQNLEEVRKMMLTN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207446 for 2675 contacts (-77.5/contact) +
2D Compatibility (PS) -34463 + (NN) -18514 + (LL) 988
1D Compatibility (HY) -20000 + (ID) 4100
Total energy: -283535.0 ( -105.99 by residue)
QMean score : 0.454
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