Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIRV-RNYEADLSAC-------RIPLGDVLGPAGVAHV-TAEVTAIDADGRRVTTST-----GASYSYDRLVLASGSHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAATVVWCAGMRAS-RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD--EHLSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 4EQS Chain:A ((1-310)) | -PKIVVVGAVAGGATCASQIRRLD-------KESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANSLGFESD--ITFTLRNLEDTDAIDQFIKA-------NQVDKVLVVGAGYVSLEVLENLYERG-----------LHPTLIHRSDKINKLMDADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGFIPVNDKFET-NVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAG------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234545 for 2376 contacts (-98.7/contact) +
2D Compatibility (PS) -31675 + (NN) -8475 + (LL) 6940
1D Compatibility (HY) -8400 + (ID) 2700
Total energy: -278855.0 ( -117.36 by residue)
QMean score : 0.357
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