Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
2HQU Chain:A ((26-164))
----LRFARLSEHATAPTR---RAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPRSGLAAKHFIDV--GAGVIDEDYRGNVGVVLFNFG-KEKFEVKKGDRIAQLICERIFYPEIEEVQALDD-----TERGSGGFGSTGKN---
General information:
TITO was launched using:
RESULT:
Template:
2HQU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86718 for 880 contacts (-98.5/contact) +
2D Compatibility (PS) -15042 + (NN) -9160 + (LL) 924
1D Compatibility (HY) -11200 + (ID) 2900
Total energy: -124096.0 ( -141.02 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_2HQU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HQU-query.scw
PDB file :
Tito_Scwrl_2HQU.pdb
: