Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4CO1 Chain:A ((1-112))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFGRQKGQTEIYRGAEYSVSFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETNTEAL
General information:
TITO was launched using:
RESULT:
Template:
4CO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61577 for 743 contacts (-82.9/contact) +
2D Compatibility (PS) -12124 + (NN) -1666 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 3150
Total energy: -90917.0 ( -122.36 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_4CO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CO1-query.scw
PDB file :
Tito_Scwrl_4CO1.pdb
: