Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRC-GAVIRRERFMNRSSFYCPRCQPRPRK |
| 4PD2 Chain:A ((1-272)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVL---TGFEQLKKELTGKTIQGISRRGKYLIFEIGD-------DFRLISHLRMEGKYRLATLDAPREKHDHLTMKFADGQLI-YADVRKFGTW---ELISTDQVLPYFLKKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKETNQLIESSIHLLHDSIIEILQKAIKLGGSSIRT--YSALGSTGKMQNELQVYGKTGEKCSRGHGAEIQKIKVAGRGTHFCPVCQQK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115953 for 2190 contacts (-52.9/contact) +
2D Compatibility (PS) -28801 + (NN) -10331 + (LL) 1256
1D Compatibility (HY) -17200 + (ID) 4500
Total energy: -175529.0 ( -80.15 by residue)
QMean score : 0.420
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