Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESM-REPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECVAVRAIRRLQMSCLDLCIGQFEDCLLEGQ------------PEVTVDDYLRMAAGKTAALTGCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLP-VVAALNSRSEAA-TELAALYQAPAAMTASDVERATALVKVAGGGHVAQRCADERIQAAIAALPDAVRSPDLIALSQLICRREC |
4DHD Chain:A ((12-335)) | -------------------------KYGAEVEKALVRYLSIGLAEDFREAVLYQV-----------KTGGKRLRPLLTLAAAEAVSGQWRPALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPK---PTLFAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHKRGNAVVAVALSHLGEGERRRLLEILARE-VVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPNNGTLKELLDFIVARE- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225603 for 2631 contacts (-85.7/contact) +
2D Compatibility (PS) -32682 + (NN) -18701 + (LL) 2408
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -291878.0 ( -110.94 by residue)
QMean score : 0.477
|
|
|