Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLAEAADAINFGLAGRVVLVTGGVRGVGAGISSVFAEQGATVITCARRAVDGQPYEFHRCDIRDEDSVKRLVGEIGERHGRLDMLVNNAGGSPYALAAEATHNFHRKIVELNVLAPLLVSQHANVLMQAQPNGGSIVNICSVSGRRPTPGTAAYGAAKAGLENLTTTLAVEWAPKVRVNAVVVGMVET----ERSELFYGD-----AESIARVAATVPLGRLARPADIGWAAAFLASDAASYISGATLEVHGGGEPPPYLGASSANK
2DTX Chain:A ((6-245))
-------------LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYM-IRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGG--------------
General information:
TITO was launched using:
RESULT:
Template:
2DTX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154945 for 1988 contacts (-77.9/contact) +
2D Compatibility (PS) -25467 + (NN) -12644 + (LL) 1068
1D Compatibility (HY) -17600 + (ID) 3800
Total energy: -213388.0 ( -107.34 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2DTX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DTX-query.scw
PDB file :
Tito_Scwrl_2DTX.pdb
: