Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGA---NLFELENFVAREVDVAPAASGAPHAAGGRL
1S3Q Chain:A ((3-164))
-----SISEKMVEALNRQINAEIYSAYLYLSMASYFDSIGLKGFSNWMRVQWQEELMHAMKMFDFVSERGGRVKLYAVEEPPSEWDSPLAAFEHVYEHEVNVTKRIHELVEMAMQEKDFATYNFLQWYVAEQVEEEASALDIVEKLRLIGEDKRALLFLDKELSLRQ-----------------
General information:
TITO was launched using:
RESULT:
Template:
1S3Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56689 for 1201 contacts (-47.2/contact) +
2D Compatibility (PS) -17924 + (NN) -15910 + (LL) 1036
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -100937.0 ( -84.04 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_1S3Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S3Q-query.scw
PDB file :
Tito_Scwrl_1S3Q.pdb
: