Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRAARPCNRFCSLLLGLALLMPASLPLSAAETVAPPSPRTLIIDTDPGADDVIALLFAMASPKELKIQALTTVAGNVPLEKTARNARLAREWGKRPDIPVYAGAPRPLLRTPIYAADVHGSEGISGVEVHEPKQPLAEGNAVDYLIRTLRAAPEKSVTLAMLGPETNLALALTQAPDIVKGVREIVIMGGAHFNGGNITPAAEFNIFADPHAAEIVLKSGAPITMLPLDVTHKI-LTSPERIAKLRNLGNQAGKTVADILDAYVQYDIKYYGLKGGPVHDATVVAYLLKPSLFK-GKRINVQVDSREGITFGQTVADWYGGLKQPANVEWINEGDAQGFFDLLTERIARLP |
3T8I Chain:A ((1-306)) | --------------------------------------MRKVIVDSDTATDDTIAILLAS--RF-FQLLGVTIVAGNVNYNQEVKNALFTLEYIGKQDVPVYLGSQRPILGNWRTVEEVHGSNGMSNWNYPEPNKRPEKEHAIDAILRLSKEH-EGELEILAISPLTNIALAYLKDPSVVKRVKKIWIMGGAFS-KGNTTPIAEFNFWVDPEAAKIVLDAGFDITIVPWEVAEISGSLNERDWEYISKLNTKLSNFFINVNKTLKEYTTKNQGISGSIHPDSLTVSIAHDNSIILDSSLKYVDVELCSK-SRGAMLIDWYSLHKNKPNAEIVLKADGGKFKNLLFNSLSQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T8I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165517 for 2815 contacts (-58.8/contact) +
2D Compatibility (PS) -33441 + (NN) -20184 + (LL) 2872
1D Compatibility (HY) -19200 + (ID) 4800
Total energy: -240270.0 ( -85.35 by residue)
QMean score : 0.591
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