Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRFEIAFSGQLVAGARPEVVKANLAKLFQADAQRIELLFSGRRVVIKNNLDAASAEKYRSVLERAGAIAVVAEMEVEEVVMAPPPAQTTPVEAPQTRAATGTSAPAGRLQV---APRDGYMAAFAEVDAPDF--GLAPVGADLQDAKAEAEAPKLDLSRFSVAPVGSDMGQARSEPAAPAPDTSHLRLQD------ |
1HF2 Chain:A ((1-206)) | MVDFKMTKEGLVLLIKDYQNLEEVLNAISARITQMGGFFAKGDRISLMIENHNKHSQDIPRIVSHLRNLGLEVSQILVGKVQSRTTVESTGKVIKRNIRSGQTVVHSGDVIVFGNVNKGAEILAGGSVVVFGKAQGNIRAGLN-EGGQAVVAALDLQTSLIQIAGFITHSKGEENVPSIAHVKGNRIVIEPFDKVSF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HF2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9472 for 1442 contacts (-6.6/contact) +
2D Compatibility (PS) -18347 + (NN) 2953 + (LL) 176
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -29790.0 ( -20.66 by residue)
QMean score : 0.315
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