Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFRKTLLITGASSGFGQALA-REALDAGH--RVVGTVRSEEARSALE------AVAPGQAFGRLLDVTDLAAIEPTVAAIERDI-GPLDVLVNSAGYGHEGILEESPLAEMRRQFEVNLFGAVAMIQAVLPYMRRRRRGHILNITSMGGYITMPGIAYYCGSKFALEGVSEALGKEVAGLGIAVTAVAPGSFRTDWAGRSMVRSPRTIADYDALFDPVRQARQEKSGKQ-----PGDPRKAARAMLQAIDAENPPAHLLLGSDALGLVRQKLKALEEEIAAWEEVTRSTDG |
1QYV Chain:A ((2-267)) | ---RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV---AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT---------SPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYVTAMHREVF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113775 for 1916 contacts (-59.4/contact) +
2D Compatibility (PS) -26330 + (NN) -9747 + (LL) 1160
1D Compatibility (HY) -17600 + (ID) 4400
Total energy: -170692.0 ( -89.09 by residue)
QMean score : 0.447
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