Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDEREGYLEILSRITTEEEFFSLVLEICGNYGFEFFSFGARAPFPLTAPKYHFLSNYPGEWKSRYISEDYTSIDPIVRHGLLEYTPLIWNGEDFQE----NRF-FWEEALHHGIRHGWSIPVRGKYGLISMLSLVRSSESIAATEILEKESFLLWITSMLQATFGDLLAPRIVPE-SNVRLTARETEMLKWTAVGKTYGEIGLILSIDQRTVKFHIVNAMRKLNSSNKAEATMKAYAIGLLN
2Q0O Chain:A ((3-236))
VNGNLRSLIDMLEAAQDGHMIKIALRSFAHSCGYDRFAYLQKDG---T--QVRTFHSYPGPWESIYLGSDYFNIDPVLAEAKRRRDVFFWTADAWPARGSSPLRRFRDEAISHGIRCGVTIPVEGSYGSAMMLTFASPERKVDISGVLDPKKAVQLLMM-VHYQLKIIAAKT--VLNPKQMLSPREMLCLVWASKGKTASVTANLTGINARTVQHYLDKARAKLDAESVPQLVAIAKDRGLV-
General information:
TITO was launched using:
RESULT:
Template:
2Q0O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131259 for 1661 contacts (-79.0/contact) +
2D Compatibility (PS) -24175 + (NN) -10537 + (LL) 696
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -178275.0 ( -107.33 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_2Q0O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q0O-query.scw
PDB file :
Tito_Scwrl_2Q0O.pdb
: