Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGIPEITAYPLPTAQQLPANLARWSLEPRRAVLLVHDMQRYFLRPLPE----SLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPGMRASPADREVVEELAPG-------PDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSEAHHRMALEYAASRCAMVVTTDEVLE
3O94 Chain:A ((21-207))
-----------------------------MTKALISIDYTEDFVADSGKLTAGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFH-PESKLFPPHNLIGTSGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKPAVASIWPENHQFALGHFKNTLGAKLVDENLNE
General information:
TITO was launched using:
RESULT:
Template:
3O94.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123275 for 1474 contacts (-83.6/contact) +
2D Compatibility (PS) -18893 + (NN) -8689 + (LL) 1616
1D Compatibility (HY) -8400 + (ID) 1700
Total energy: -159341.0 ( -108.10 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3O94.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O94-query.scw
PDB file :
Tito_Scwrl_3O94.pdb
: