Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLSNAQRALIKATVPLLETGGEALITHFYRTMLGEYPEVRPLFNQAHQASGDQPRALANGVLMYARHIDQLQELGPLVAKVVNKHVSLQVLPEHYPIVGTCLLRAIREVLGEQIATDEVLEAWGAAYQQLADLLIEAEESVYAASAQADGGWRGVRRFRVARKQAESEEITSFYLEPVDGQPLLAFQPGQYIGLRLDIDGE--EVRRNYSLSAASNGREYRISVKREAGGRVSNYLHDRVAEGDELDLFPPAGDFVLRD-SDKPLVLITAGVGITPALAMLQEALP--QARPIRFIHCARHGGVHAFRDWIEDVSAQHEQVEHFFCYSEPRAGD----SADAEGLLSREKLADWLPQERDLDAYFLGPRPFMAQVKRHLADLGVPSQQCHYEFFGPAAALDA
1GVH Chain:A ((1-396))MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSP---GQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEGLMDLSKLEGAFS-DPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL--


General information:
TITO was launched using:
RESULT:

Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -230986 for 3136 contacts (-73.7/contact) +
2D Compatibility (PS) -41339 + (NN) -15948 + (LL) 656
1D Compatibility (HY) -31600 + (ID) 8100
Total energy: -327317.0 ( -104.37 by residue)
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_1GVH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVH-query.scw
PDB file : Tito_Scwrl_1GVH.pdb: