Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKTWIYAASAAAIGGALIGGWLLDPAPPEASPQARQSPAAQAAAAPTAALAAPAADATRMLAPTPVTTPAPRERVTLWQGELRSREGAQGIPEYLAQVEPALLDTLALGQVLE-MSLPGRERPLQARLASTHNSAGLPVWRGGLVDGDEAESLTVVRGSLETHINVATLDGSYSIIVDNRSGKTRVIDENDIAARSDPHGDHVDAPLAELPPMPPPAQG |
2Z54 Chain:B ((2-47)) | --------------------------------------------------------------------------QITLWQRPLVTIKIG-------GQLKEALLDTGADDTVLEEMSLPGRWKPKMA--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 779 for 174 contacts (4.5/contact) +
2D Compatibility (PS) -4093 + (NN) 6094 + (LL) 8828
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: 7258.0 ( 41.71 by residue)
QMean score : -0.016
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