Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARGRLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEVQAGLDRLLPNLLERLNG
3HJN Chain:B ((1-182))
---MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEEVTPKA---ELFLFLASR-NLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKR-------NRFEK--REFLERVREGYLVLAREHPERIVVLDGKRSIEEIH----------------
General information:
TITO was launched using:
RESULT:
Template:
3HJN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48788 for 1449 contacts (-33.7/contact) +
2D Compatibility (PS) -20595 + (NN) -16784 + (LL) 1800
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -105217.0 ( -72.61 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_3HJN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HJN-query.scw
PDB file :
Tito_Scwrl_3HJN.pdb
: