Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFALIGAAGYIAPRHMRAIKDT-GNCLVSAYDINDSV-GIIDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIERETDKRLYNILQLRHHQAIIALKDKVAREKSPHKYEVDLTYITSRGN-WYLKSWKGDPR-KSFGVATNIGVHFYDMLHFIFGKLQRNVVHF-------TSEYKAAGYLEYEQARV-RWFLSVDANDLP---ESVKGKKPTYRS---------I-----TV--NG---EE---------MEFSEGFTDLHTTSYEEILAGRGY--GIDDARHCVETVNTIRSAVIVPASDNEGHPFVAALAR |
| 3DB2 Chain:A ((5-345)) | PVGVAAIGLG-RWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYN-CAGDATMEALLA---------REDVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEIGEVSSIEAVFSNERGLELKKGNWRGEPATAPGGPLTQLGVHQIDNLQFLLGPVARVFNFGKPMYTEVENITVNQTLLEFEDGKQAYLGTNWACPGVFSINVYGTKANLFYQLDFSWWSNSDVTDEHSTLIKREFAS-NRILRDVKVDFESVDHLRVEVEEVADVIRNGGETEIGAEASLRNLAVVLAAVKSVHEKR-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146694 for 2441 contacts (-60.1/contact) +
2D Compatibility (PS) -30165 + (NN) 1971 + (LL) 1052
1D Compatibility (HY) -800 + (ID) 2600
Total energy: -177236.0 ( -72.61 by residue)
QMean score : 0.416
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