Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVRHFLSFMDYSPEELIGLIRRGSELKDLRNRGVLYEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHR---GSIQGKTVAWIGDGNNMCNSYIEAALKFDFQLRVACPEGYEPKAEFVALAGDRLRV------VRDPREAVAGAHLVSTDVWASMGQ-EDEAAARIALFRP-YQVNAALLDGAADDVLFMHCLPAHRGEEISEELLDDPRSVAWDQAENRLHAQKALLELLIEHAHYA |
| 4A8T Chain:A ((25-331)) | ---RDYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQLLKNKSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPG-IQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFLVTDDASSVEGADFLYTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHCLPATRGEEVTDEVIDGKNSICFDEAENRLTSIRGLLVYLM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171283 for 2554 contacts (-67.1/contact) +
2D Compatibility (PS) -32461 + (NN) -16896 + (LL) 868
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -248972.0 ( -97.48 by residue)
QMean score : 0.596
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