Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRIL-SLGAVHFFQVL---GSGQPEQDAKVLTSIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
2ZB9 Chain:A ((17-201))
----------------------------GRRPAEEVRAEVLHAVGELLLTEGTAQLTFERVARVSGVSKTTLYKWWPSKGALALDGYFHAVEDTLAFPDT-----------------------GDVRADLLAQLRAFTHVMTR-TPGG-RILTELIGAAQTDADLATAYRQLYSAQRRALAAERLRHARELGQIRPDVDVQVLVDQLWGAVYHRLLIPDEPVDDAFVTALVTNLLDGV---
General information:
TITO was launched using:
RESULT:
Template:
2ZB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83402 for 1284 contacts (-65.0/contact) +
2D Compatibility (PS) -19853 + (NN) -12622 + (LL) 4296
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -115081.0 ( -89.63 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2ZB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZB9-query.scw
PDB file :
Tito_Scwrl_2ZB9.pdb
: