Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRTLAFVSTLLLAAFCA-------LPAQADSFIMRLLNKPVPGGVAVVDLGEEGPPPRAFY---QGKPVLVVREEGRRWIAVVGIPLSTKP--------GPQKLEVRAATG-----NHEERFSVGSKHYRE----QRITLKNKRQVNPLPEDLKRIERELAEQTA---AYRRFSPG----------LPSNLMLDKPVDG-PLSSPFGLRRFFNGEERNPHSGLDFAVPAGTPIKAPAAGKVILIGDYFFNGKTVFVDHGQGFISMFCHLSKID--VKLGQQVPRGGVLGKVGATGRATGPHMHWNVSLNDARVDPAIFIGAFQP----------------------------------------------- |
| 4RNZ Chain:A ((1-369)) | MERLVW--DKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQSNVTYYTLRDANNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIIKATNDPLLANQLMNAYKKSVPFKRLVKNDKIAIVYTRDYR-VGQAFGQPTIKMAMVSSRSNQYYLFSHSNGHYYDSKAQEVAGFLLETPVKYTRISSPFSYGRF-----HRPHYGVDYAAKHGSLIHSASDGRVGFMGVKAGYGKVVEIHLNE-LRLVYAHMSAFANGLKKGSFVKKGQIIGRVGSTG----PHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQRSKQKLEELLKTHSFEKNSFYLLEGFLEHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81520 for 1956 contacts (-41.7/contact) +
2D Compatibility (PS) -29338 + (NN) -14455 + (LL) 224
1D Compatibility (HY) -14000 + (ID) 3100
Total energy: -142189.0 ( -72.69 by residue)
QMean score : 0.348
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