Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDTGRRILLNCDMGESFGAWRMGDDVHS-MPLVDQANLACGFHAGDP-------LTMRRAVELAVRHGVSIGAH---------PAYPDLSGFGRRSLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKPHGALYNDLVGDDEL--LRAVLDACAAYRKGLPLMVLALADNGRELELADEADVPLLFEAFADR--------------AYLPDGRLAPRRLGGAVHHDP-----------QRIIEQALAIARGEAFPDYDGNPLRLTADSLCVHGDNPQS----LAVLRR--------LRAALDSL---------------- |
| 4NDN Chain:F ((15-323)) | --IPNRRVLVTGATG------LLGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVDAASQLNVDASGNLAKEAAAVGAFLIY-ISSDYVFD---GTNPPYREEDIPAPLNLYGKTKLDGEKAVLEN------NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAF-NLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFRIGIKESLWPFLIDKRWRQTVFH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93974 for 1671 contacts (-56.2/contact) +
2D Compatibility (PS) -25180 + (NN) -13765 + (LL) 1292
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -143227.0 ( -85.71 by residue)
QMean score : 0.118
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