Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQDIHARSATTTPMPSVRNQEEVAKLIDVSKCIGCKACQVACSEWNELRDEVGHNHGTYDNPMDLTADSWTVMRFTEHENEAGNLEWLIRKDGCMHCAEPGCLKACPSPGAIVKYANGIVDFNQDKCIGCGYCITGCPFDIPRISQKDHKAYKCSLCSDRVSVGMEPACVKTCPTGAIVFGSKEDMKEHAAERIVDLKSRGYENAGLYDPEGVGGTHVMYVLHHADKPSLYAGLADQPSVSPLVSLWKGVTKPLALLAMGATVLAGFFHYVRVGPNRADDEEDHGQAEAPVHQVDPSVHTFDPHERR |
| 2VPZ Chain:B ((1-151)) | ---------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVF---N-----------LW--IREREVG-EYPNLVVEFRPEQCLHCENPPCVPVCPT-GASYQTKDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCAHRLEKGKVPACVETCPTYCRTFGDLEDPESP---------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VPZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55730 for 1063 contacts (-52.4/contact) +
2D Compatibility (PS) -15705 + (NN) -5511 + (LL) 7580
1D Compatibility (HY) -11200 + (ID) 3000
Total energy: -83566.0 ( -78.61 by residue)
QMean score : 0.258
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