Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNPENWTQVTSFVLLGF----PSSHLIQFLVFLGLMVTYIVTATGKLLIIVLSWIDQRLHIQMYFFLRNFSFLELLLVTVVVPKMLVVILTGDHTI-----SFVSCIIQSYLYFFLGTTDFFLLAVMSLDRYLAICRPLRYETLMNGHVCSQLVLASWLAGFLWVLCPTVLMASLPFCGPNGIDHFFRDSWPLLRLSCGDTHLLKLVAFMLSTLVLLGSLALTSVSYACILATVLRAPTAA----ERRKAFSTCASHLTVVVII-------YGSSIFLYIRMSEAQSKLLNKGASVLSCIITPLLNPFIFTLRNDKVQQALREALG--------WPRLTAVMKLRVTSQRK---- |
4R6Y Chain:A ((1-317)) | ---SMESVVTVYSIDGLHDGDNSWYQVQFDAFTKATGITVRYVEGGGGVVVERLAKERTNPQADVLVTAPPFIQRAAA----EKLLANFNTDTASAIPDANNLYSPLVKNYLSFIYNSK-------------LLKTAPASWQDLLDGKFKNKLQYSTPGQA---ADGTAVMLQAFHSFGS------KDAGFAYLGKLQANNVGPSASTGKLTALVNKGEIYVANGDLQMNLAQMERNPNVKIFWPANDKGERSALAIPYVIGLVQGAPQSENGKKLINFLLSKEAQTRVSELSWGMP---VRSDVTP------SDEHYKAATAALEGVQSWQPNWDDVAVSLSADISRWHKVTES |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4R6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -307949 for 2349 contacts (-131.1/contact) +
2D Compatibility (PS) -30218 + (NN) -8673 + (LL) 3508
1D Compatibility (HY) 0 + (ID) 2400
Total energy: -345732.0 ( -147.18 by residue)
QMean score : 0.272
|
|
|