Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLDKE-ITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTG---REKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE-----
2FBH Chain:A ((10-146))
----------YFGTLLAQTSRAWRAELDRRLSHLGLSQARWLVLLHLARHRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRRAKHIVLTPKADVLIADIEAIAASVRNDVLTGIDESEQALCQQVLLRILANLENR
General information:
TITO was launched using:
RESULT:
Template:
2FBH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34559 for 777 contacts (-44.5/contact) +
2D Compatibility (PS) -13931 + (NN) -5542 + (LL) 1032
1D Compatibility (HY) -6800 + (ID) 1250
Total energy: -61050.0 ( -78.57 by residue)
QMean score : 0.619
(partial model without unconserved sides chains):
PDB file :
Tito_2FBH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBH-query.scw
PDB file :
Tito_Scwrl_2FBH.pdb
: