Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQVNYISNFTDVDDKIIK------------------------------------------------GAAE------AG-----MDTKSFSDKFISAFMEDVAALGVKPATKNPRVIDYMD-EIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEI--LGDTIDIHGGGADLEFPHHTNEIAQSEAKTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDMLKS----------------------------VDGQVIRFFLATQQYRKPVNFTEKAVHDAE-VNLKYLKNTFNLPIQENAN-------------------------DEELEQFVKAFQEAMDDDFNTANGITVIFEMAKWINSGHYT------------------SKVKETLAELLEIFGIVFQEEVLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTRD |
1F7U Chain:A ((141-603)) | ------------------ENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYD-VYSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKF---NK----K---L--G--KAI----VQKSD------------GTTLYLTR----------DVGAAMDRYEKYHFDKMIYVIASQQDL-HA-AQFFEILKQMGFEWAKDLQHVNFGMVQ--GMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLIRLLGQYPDVLRNAI-KTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLLGLTPVERM-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130377 for 2558 contacts (-51.0/contact) +
2D Compatibility (PS) -35142 + (NN) -11134 + (LL) 7324
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -184479.0 ( -72.12 by residue)
QMean score : 0.386
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