Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MQILEDYDGRALPKLETDRLILRQRTVGDVPAMFDYVCLEEVAYPAGLSPIASLEDEYDYFENRYYQNLEKAKLPSGYGITVKGSDRIIGSCAF-NHRREDDVFEIGYLLHPDYWGHGYMTEAVAALIEVGFTLLNLHKIEIRCYDYNKQSQRVAEKLGFTLEATIRDRKDNQGNRCVNLIYGLLRSEWE--
4MI4 Chain:A ((26-195))
NSQLTLRALERGDLRFIHNLNNNRNIMSYW------------------FEEPYESFDELEELYNKHIHDN---------AERRFVVEDAQKNLIGLVELIEINYIHRSAEFQIIIAPEHQGKGFARTLINRALDYSFTILNLHKIYLHVAVENPKAVHLYEECGFVEEGHLVEEFFINGRYQDVKRMYILQSKYLNR
General information:
TITO was launched using:
RESULT:
Template:
4MI4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70434 for 1106 contacts (-63.7/contact) +
2D Compatibility (PS) -17895 + (NN) -8882 + (LL) 2376
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -103635.0 ( -93.70 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_4MI4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MI4-query.scw
PDB file :
Tito_Scwrl_4MI4.pdb
: